Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796534.1_cds_XP_016450132.1_4395
CDS Infomation

[gene=LOC107774982] [db_xref=GeneID:107774982] [protein=pentatricopeptide repeat-containing protein At4g02820, mitochondrial-like] [protein_id=XP_016450132.1] [location=complement(join(16870..18126,18614..18961))] [gbkey=CDS]
Sequence

ATGTTGCTCCGTTTGGTTCGGCGATCTTTTGTTGCTGTTCGCCCTTTATCGACTGAAGCT
GCAACGGCAGTGAAGTCCACAAGTTTAGGAGGTGGCACAAGCTCTAGCACAAGTTTAGAA
GGTGGCACTAGTATTACCACAAGCTTAAAAGGTGGTTCTAGTACTACCATAAGTACTGGT
GGCAGAGACACGCTAGGGAAGAGGCTTTTGAGCTTGATCTATGCAAAGCGTAGTGCTGTC
ATTGCTATACGCAAGTGGAAGGAAGAAGGGCACCCTGTCCGCAAGTATGAGCTCAATCGT
ATTGTTCGGGAGTTGCGAAGACACAAACGATATAAACATGCCCTTGAGGTTTGTGAATGG
ATGAGGGTACAGGATGATATCCAACTATTACATGGTGACTATGCAGTTCATTTGGACTTG
ATTGCAAAAGTTCGTGGTATGAACAGTGCAGAGAAGTTCTTTGAAGACCTACCTGATAAA
CTGAAGGCCCAGACCACTTGTACCGCCCTTCTCCACAACTATGTCCAGCACAAGAATACT
GCTAAAGCTGAGGCTTTGATGGAAAAAATGTCCGAATGTGGTTTCTTGAAATGCGCTCTT
CCTTATAATCATATGCTTTCCTTATACATATCCCAAGGGCAACTAGAGAAGGTTCCCCGC
CTGATTCAGGAATTGAAGAAAAATACCTCTCCTGATATTGTCACATACAACCTGGAGTTG
GCAGTTTGTGCATCCCAGAATGATGTTGAAGCTGCAGAGAAAACATTCCTCGAGCTAAAG
AAGGCAAAATTGGATCCTGACTGGATAACATTTAGCACATTAACAAACATCTATATTAAA
AGCTCACTTAAGGATAAAGCAAAGTCAACTTTGAGAGAAATGGAGAAAAGGATTTCCAGA
AAGGTTCGAGCTGCATATGGTTCTCTCCTTAGTTTGCATACAAATCTAGAGAGCAAGGAT
GAAGTTTTGCGAATATGGAAGAAGATGAAGTCAATCTTCCGTAAATTGAATGATGCAGAA
TATACTTGTATGATATCTTCTCTATTGAAACTGGATGAGTTCGGAGAAGCAATGAATCTG
TATACTGAATGGGAATCTGTCTCTGTGACGAGGGATTCTAGGATTTCGAATTTACTTCTT
GCTGCTGACATTAACAAAAATGAGATGGAAAAGGCTGTCGATTTTCACAACAGAACGGTG
CAGAAAGGCGTTTCTCCTAGCTACACCACTTGGGAGCTTCTTACATGGGGTTATTTGAAG
CAAAAGGAAATGGGTAAAGTTCTAGAATATTTCAAAAAAGCTGTTACTAGTGTTTCAAAA
TGGGATCCTGATGCAAAGATGGTTCAAGAGATGTTTCATGTAGTTGAAGAGCAGGGCAAT
GTTCAGGTGGCAGAGCAGTTGCTAGTTACCCTTCGACATGCTAAATATGGTAATACAGAG
ATATATAATGCACTTCTCCGAACTTATGCAAAAGCGGGTAAGATGCCAATGATAGTTGCA
GAGAGGATGAAAAAGGATAATGTGAAGATGGATGAGGAGACTCAAAAGCTAATTACATTA
ACTAGCAAGATGACTGTGACTGAGGTTCCAAGTTCTATTGCTTAA

Peptide Sequence

PEP ID

XP_016450132.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g02820, mitochondrial-like [Nicotiana tabacum]
Sequence

MLLRLVRRSFVAVRPLSTEAATAVKSTSLGGGTSSSTSLEGGTSITTSLKGGSSTTISTG
GRDTLGKRLLSLIYAKRSAVIAIRKWKEEGHPVRKYELNRIVRELRRHKRYKHALEVCEW
MRVQDDIQLLHGDYAVHLDLIAKVRGMNSAEKFFEDLPDKLKAQTTCTALLHNYVQHKNT
AKAEALMEKMSECGFLKCALPYNHMLSLYISQGQLEKVPRLIQELKKNTSPDIVTYNLEL
AVCASQNDVEAAEKTFLELKKAKLDPDWITFSTLTNIYIKSSLKDKAKSTLREMEKRISR
KVRAAYGSLLSLHTNLESKDEVLRIWKKMKSIFRKLNDAEYTCMISSLLKLDEFGEAMNL
YTEWESVSVTRDSRISNLLLAADINKNEMEKAVDFHNRTVQKGVSPSYTTWELLTWGYLK
QKEMGKVLEYFKKAVTSVSKWDPDAKMVQEMFHVVEEQGNVQVAEQLLVTLRHAKYGNTE
IYNALLRTYAKAGKMPMIVAERMKKDNVKMDEETQKLITLTSKMTVTEVPSSIA

Transcript Sequence

Gene sequence data has not been registered.